==41573== Memcheck, a memory error detector ==41573== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41573== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41573== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41573== Parent PID: 24130 ==41573== ==41573== ==41573== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41573== Open file descriptor 12: ==41573== at 0xBC4A07D: pipe (pipe.c:29) ==41573== by 0x1433D07D: ??? ==41573== by 0xFB2E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41573== by 0xB4F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41573== by 0xB48CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41573== by 0xA160D38: PetscInitialize (pinit.c:924) ==41573== by 0xA0372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41573== by 0xA03732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41573== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41573== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41573== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41573== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41573== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41573== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41573== ==41573== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41573== at 0xBC4EA1C: __open_nocancel (open64_nocancel.c:39) ==41573== by 0xBBD2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41573== by 0xB3EF822: ??? ==41573== by 0xB3EF96F: ??? ==41573== by 0xFBD36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41573== by 0xFBD3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41573== by 0xFB89922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41573== by 0xFB2E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41573== by 0xB4F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41573== by 0xB48CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41573== by 0xA160D38: PetscInitialize (pinit.c:924) ==41573== by 0xA0372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41573== by 0xA03732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41573== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41573== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41573== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41573== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41573== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41573== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41573== ==41573== Open file descriptor 113: ==41573== ==41573== ==41573== Open file descriptor 110: ==41573== ==41573== ==41573== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41573== ==41573== ==41573== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41573== ==41573== ==41573== ==41573== HEAP SUMMARY: ==41573== in use at exit: 618,890 bytes in 8,249 blocks ==41573== total heap usage: 428,247 allocs, 419,998 frees, 1,437,386,205 bytes allocated ==41573== ==41573== LEAK SUMMARY: ==41573== definitely lost: 0 bytes in 0 blocks ==41573== indirectly lost: 0 bytes in 0 blocks ==41573== possibly lost: 0 bytes in 0 blocks ==41573== still reachable: 120 bytes in 3 blocks ==41573== suppressed: 618,770 bytes in 8,246 blocks ==41573== Reachable blocks (those to which a pointer was found) are not shown. ==41573== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41573== ==41573== For lists of detected and suppressed errors, rerun with: -s ==41573== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 53 from 36)