==41583== Memcheck, a memory error detector ==41583== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41583== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41583== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info ==41583== Parent PID: 24130 ==41583== ==41583== ==41583== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41583== Open file descriptor 12: ==41583== at 0xBBE407D: pipe (pipe.c:29) ==41583== by 0x1433D07D: ??? ==41583== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41583== by 0xBF61418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41583== by 0xBEFAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41583== by 0xA254D38: PetscInitialize (pinit.c:924) ==41583== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41583== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41583== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41583== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41583== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41583== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41583== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41583== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==41583== ==41583== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41583== at 0xBBE8A1C: __open_nocancel (open64_nocancel.c:39) ==41583== by 0xBB6CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41583== by 0xA100822: ??? ==41583== by 0xA10096F: ??? ==41583== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41583== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41583== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41583== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41583== by 0xBF61418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41583== by 0xBEFAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41583== by 0xA254D38: PetscInitialize (pinit.c:924) ==41583== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41583== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41583== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41583== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41583== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41583== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41583== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41583== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==41583== ==41583== Open file descriptor 113: ==41583== ==41583== ==41583== Open file descriptor 110: ==41583== ==41583== ==41583== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt ==41583== ==41583== ==41583== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41583== ==41583== ==41583== ==41583== HEAP SUMMARY: ==41583== in use at exit: 618,410 bytes in 8,239 blocks ==41583== total heap usage: 192,055 allocs, 183,816 frees, 1,381,056,273 bytes allocated ==41583== ==41583== LEAK SUMMARY: ==41583== definitely lost: 0 bytes in 0 blocks ==41583== indirectly lost: 0 bytes in 0 blocks ==41583== possibly lost: 0 bytes in 0 blocks ==41583== still reachable: 120 bytes in 3 blocks ==41583== suppressed: 618,290 bytes in 8,236 blocks ==41583== Reachable blocks (those to which a pointer was found) are not shown. ==41583== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41583== ==41583== For lists of detected and suppressed errors, rerun with: -s ==41583== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)