==25618== Memcheck, a memory error detector ==25618== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25618== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25618== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25618== Parent PID: 24130 ==25618== ==25618== ==25618== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25618== Open file descriptor 12: ==25618== at 0xED9307D: pipe (pipe.c:29) ==25618== by 0x196C407D: ??? ==25618== by 0x13C4E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25618== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25618== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25618== by 0xD62DD38: PetscInitialize (pinit.c:924) ==25618== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25618== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25618== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25618== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25618== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25618== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25618== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25618== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25618== ==25618== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25618== at 0xED97A1C: __open_nocancel (open64_nocancel.c:39) ==25618== by 0xED1BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25618== by 0xD4D7822: ??? ==25618== by 0xD4D796F: ??? ==25618== by 0x13CF36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25618== by 0x13CF3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25618== by 0x13CA9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25618== by 0x13C4E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25618== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25618== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25618== by 0xD62DD38: PetscInitialize (pinit.c:924) ==25618== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25618== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25618== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25618== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25618== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25618== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25618== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25618== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25618== ==25618== Open file descriptor 113: ==25618== ==25618== ==25618== Open file descriptor 110: ==25618== ==25618== ==25618== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25618== ==25618== ==25618== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25618== ==25618== ==25618== ==25618== HEAP SUMMARY: ==25618== in use at exit: 618,442 bytes in 8,241 blocks ==25618== total heap usage: 57,242 allocs, 49,001 frees, 1,339,472,522 bytes allocated ==25618== ==25618== LEAK SUMMARY: ==25618== definitely lost: 0 bytes in 0 blocks ==25618== indirectly lost: 0 bytes in 0 blocks ==25618== possibly lost: 0 bytes in 0 blocks ==25618== still reachable: 168 bytes in 5 blocks ==25618== suppressed: 618,274 bytes in 8,236 blocks ==25618== Reachable blocks (those to which a pointer was found) are not shown. ==25618== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25618== ==25618== For lists of detected and suppressed errors, rerun with: -s ==25618== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)