==41270== Memcheck, a memory error detector ==41270== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41270== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41270== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==41270== Parent PID: 24130 ==41270== ==41270== ==41270== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41270== Open file descriptor 12: ==41270== at 0x125B307D: pipe (pipe.c:29) ==41270== by 0x1B38407D: ??? ==41270== by 0x1652A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41270== by 0x11E76418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41270== by 0x11E0FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41270== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==41270== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41270== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41270== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41270== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41270== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41270== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41270== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41270== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==41270== ==41270== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41270== at 0x125B7A1C: __open_nocancel (open64_nocancel.c:39) ==41270== by 0x1253BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41270== by 0x11D72822: ??? ==41270== by 0x11D7296F: ??? ==41270== by 0x165CF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41270== by 0x165CF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41270== by 0x16585922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41270== by 0x1652A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41270== by 0x11E76418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41270== by 0x11E0FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41270== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==41270== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41270== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41270== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41270== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41270== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41270== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41270== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41270== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==41270== ==41270== Open file descriptor 113: ==41270== ==41270== ==41270== Open file descriptor 110: ==41270== ==41270== ==41270== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==41270== ==41270== ==41270== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41270== ==41270== ==41270== ==41270== HEAP SUMMARY: ==41270== in use at exit: 618,442 bytes in 8,240 blocks ==41270== total heap usage: 1,753,594 allocs, 1,745,354 frees, 1,514,888,664 bytes allocated ==41270== ==41270== LEAK SUMMARY: ==41270== definitely lost: 0 bytes in 0 blocks ==41270== indirectly lost: 0 bytes in 0 blocks ==41270== possibly lost: 0 bytes in 0 blocks ==41270== still reachable: 152 bytes in 4 blocks ==41270== suppressed: 618,290 bytes in 8,236 blocks ==41270== Reachable blocks (those to which a pointer was found) are not shown. ==41270== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41270== ==41270== For lists of detected and suppressed errors, rerun with: -s ==41270== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)