==1947939== Memcheck, a memory error detector ==1947939== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1947939== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1947939== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1947939== Parent PID: 1931811 ==1947939== ==1947939== ==1947939== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1947939== Open file descriptor 12: ==1947939== at 0x125BB07D: pipe (pipe.c:29) ==1947939== by 0x1B37707D: ??? ==1947939== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1947939== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947939== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947939== by 0x10B53D38: PetscInitialize (pinit.c:924) ==1947939== by 0x109C22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1947939== by 0x109C232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1947939== by 0x224461: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1947939== by 0x21BE79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1947939== by 0x21FA80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1947939== by 0x21F920: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1947939== by 0x21FFB7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1947939== by 0x21A295: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1947939== ==1947939== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1947939== at 0x125BFA1C: __open_nocancel (open64_nocancel.c:39) ==1947939== by 0x12543BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1947939== by 0x109F7822: ??? ==1947939== by 0x109F796F: ??? ==1947939== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947939== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947939== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947939== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1947939== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947939== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947939== by 0x10B53D38: PetscInitialize (pinit.c:924) ==1947939== by 0x109C22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1947939== by 0x109C232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1947939== by 0x224461: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1947939== by 0x21BE79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1947939== by 0x21FA80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1947939== by 0x21F920: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1947939== by 0x21FFB7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1947939== by 0x21A295: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1947939== ==1947939== Open file descriptor 115: ==1947939== ==1947939== ==1947939== Open file descriptor 112: ==1947939== ==1947939== ==1947939== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1947939== ==1947939== ==1947939== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1947939== ==1947939== ==1947939== ==1947939== HEAP SUMMARY: ==1947939== in use at exit: 995,542 bytes in 13,910 blocks ==1947939== total heap usage: 3,730,898 allocs, 3,716,988 frees, 1,854,668,136 bytes allocated ==1947939== ==1947939== LEAK SUMMARY: ==1947939== definitely lost: 0 bytes in 0 blocks ==1947939== indirectly lost: 0 bytes in 0 blocks ==1947939== possibly lost: 0 bytes in 0 blocks ==1947939== still reachable: 56 bytes in 3 blocks ==1947939== suppressed: 995,486 bytes in 13,907 blocks ==1947939== Reachable blocks (those to which a pointer was found) are not shown. ==1947939== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1947939== ==1947939== For lists of detected and suppressed errors, rerun with: -s ==1947939== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)