==1933129== Memcheck, a memory error detector ==1933129== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1933129== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1933129== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==1933129== Parent PID: 1931811 ==1933129== ==1933129== ==1933129== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1933129== Open file descriptor 12: ==1933129== at 0xEF9607D: pipe (pipe.c:29) ==1933129== by 0x196B607D: ??? ==1933129== by 0x13C5B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1933129== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933129== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933129== by 0xD873D38: PetscInitialize (pinit.c:924) ==1933129== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1933129== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1933129== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1933129== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1933129== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1933129== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1933129== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1933129== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1933129== ==1933129== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1933129== at 0xEF9AA1C: __open_nocancel (open64_nocancel.c:39) ==1933129== by 0xEF1EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1933129== by 0xD717822: ??? ==1933129== by 0xD71796F: ??? ==1933129== by 0x13D006DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933129== by 0x13D00938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933129== by 0x13CB6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933129== by 0x13C5B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1933129== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933129== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933129== by 0xD873D38: PetscInitialize (pinit.c:924) ==1933129== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1933129== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1933129== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1933129== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1933129== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1933129== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1933129== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1933129== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1933129== ==1933129== Open file descriptor 115: ==1933129== ==1933129== ==1933129== Open file descriptor 112: ==1933129== ==1933129== ==1933129== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==1933129== ==1933129== ==1933129== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1933129== ==1933129== ==1933129== ==1933129== HEAP SUMMARY: ==1933129== in use at exit: 995,542 bytes in 13,911 blocks ==1933129== total heap usage: 4,191,961 allocs, 4,178,050 frees, 2,003,155,345 bytes allocated ==1933129== ==1933129== LEAK SUMMARY: ==1933129== definitely lost: 0 bytes in 0 blocks ==1933129== indirectly lost: 0 bytes in 0 blocks ==1933129== possibly lost: 0 bytes in 0 blocks ==1933129== still reachable: 72 bytes in 4 blocks ==1933129== suppressed: 995,470 bytes in 13,907 blocks ==1933129== Reachable blocks (those to which a pointer was found) are not shown. ==1933129== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1933129== ==1933129== For lists of detected and suppressed errors, rerun with: -s ==1933129== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)