==1933922== Memcheck, a memory error detector ==1933922== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1933922== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1933922== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1933922== Parent PID: 1931811 ==1933922== ==1933922== ==1933922== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1933922== Open file descriptor 12: ==1933922== at 0xF92D07D: pipe (pipe.c:29) ==1933922== by 0x196B507D: ??? ==1933922== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1933922== by 0x1158A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933922== by 0x11523D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933922== by 0x1021AD38: PetscInitialize (pinit.c:924) ==1933922== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1933922== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1933922== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1933922== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1933922== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1933922== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1933922== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1933922== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1933922== ==1933922== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1933922== at 0xF931A1C: __open_nocancel (open64_nocancel.c:39) ==1933922== by 0xF8B5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1933922== by 0xF137822: ??? ==1933922== by 0xF13796F: ??? ==1933922== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933922== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933922== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1933922== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1933922== by 0x1158A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933922== by 0x11523D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1933922== by 0x1021AD38: PetscInitialize (pinit.c:924) ==1933922== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1933922== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1933922== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1933922== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1933922== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1933922== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1933922== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1933922== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==1933922== ==1933922== Open file descriptor 115: ==1933922== ==1933922== ==1933922== Open file descriptor 112: ==1933922== ==1933922== ==1933922== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1933922== ==1933922== ==1933922== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1933922== ==1933922== ==1933922== ==1933922== HEAP SUMMARY: ==1933922== in use at exit: 995,526 bytes in 13,910 blocks ==1933922== total heap usage: 12,896,949 allocs, 12,883,039 frees, 4,095,100,651 bytes allocated ==1933922== ==1933922== LEAK SUMMARY: ==1933922== definitely lost: 0 bytes in 0 blocks ==1933922== indirectly lost: 0 bytes in 0 blocks ==1933922== possibly lost: 0 bytes in 0 blocks ==1933922== still reachable: 56 bytes in 3 blocks ==1933922== suppressed: 995,470 bytes in 13,907 blocks ==1933922== Reachable blocks (those to which a pointer was found) are not shown. ==1933922== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1933922== ==1933922== For lists of detected and suppressed errors, rerun with: -s ==1933922== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)