==1947456== Memcheck, a memory error detector ==1947456== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1947456== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1947456== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1947456== Parent PID: 1931811 ==1947456== ==1947456== ==1947456== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1947456== Open file descriptor 12: ==1947456== at 0xF80207D: pipe (pipe.c:29) ==1947456== by 0x196B507D: ??? ==1947456== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1947456== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947456== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947456== by 0x10133D38: PetscInitialize (pinit.c:924) ==1947456== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1947456== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1947456== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1947456== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1947456== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1947456== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1947456== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1947456== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1947456== ==1947456== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1947456== at 0xF806A1C: __open_nocancel (open64_nocancel.c:39) ==1947456== by 0xF78ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1947456== by 0xF137822: ??? ==1947456== by 0xF13796F: ??? ==1947456== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947456== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947456== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1947456== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1947456== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947456== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1947456== by 0x10133D38: PetscInitialize (pinit.c:924) ==1947456== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1947456== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1947456== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1947456== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1947456== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1947456== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1947456== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1947456== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1947456== ==1947456== Open file descriptor 115: ==1947456== ==1947456== ==1947456== Open file descriptor 112: ==1947456== ==1947456== ==1947456== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==1947456== ==1947456== ==1947456== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1947456== ==1947456== ==1947456== ==1947456== HEAP SUMMARY: ==1947456== in use at exit: 995,526 bytes in 13,910 blocks ==1947456== total heap usage: 5,234,692 allocs, 5,220,782 frees, 2,011,472,614 bytes allocated ==1947456== ==1947456== LEAK SUMMARY: ==1947456== definitely lost: 0 bytes in 0 blocks ==1947456== indirectly lost: 0 bytes in 0 blocks ==1947456== possibly lost: 0 bytes in 0 blocks ==1947456== still reachable: 56 bytes in 3 blocks ==1947456== suppressed: 995,470 bytes in 13,907 blocks ==1947456== Reachable blocks (those to which a pointer was found) are not shown. ==1947456== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1947456== ==1947456== For lists of detected and suppressed errors, rerun with: -s ==1947456== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)