==1948140== Memcheck, a memory error detector ==1948140== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1948140== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1948140== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1948140== Parent PID: 1931811 ==1948140== ==1948140== ==1948140== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1948140== Open file descriptor 12: ==1948140== at 0x1257907D: pipe (pipe.c:29) ==1948140== by 0x1B37707D: ??? ==1948140== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1948140== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1948140== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1948140== by 0x10AEBD38: PetscInitialize (pinit.c:924) ==1948140== by 0x109C22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1948140== by 0x109C232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1948140== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1948140== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1948140== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1948140== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1948140== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1948140== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==1948140== ==1948140== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1948140== at 0x1257DA1C: __open_nocancel (open64_nocancel.c:39) ==1948140== by 0x12501BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1948140== by 0x11D75822: ??? ==1948140== by 0x11D7596F: ??? ==1948140== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1948140== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1948140== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1948140== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1948140== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1948140== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1948140== by 0x10AEBD38: PetscInitialize (pinit.c:924) ==1948140== by 0x109C22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1948140== by 0x109C232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1948140== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1948140== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1948140== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1948140== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1948140== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1948140== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==1948140== ==1948140== Open file descriptor 115: ==1948140== ==1948140== ==1948140== Open file descriptor 112: ==1948140== ==1948140== ==1948140== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==1948140== ==1948140== ==1948140== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1948140== ==1948140== ==1948140== ==1948140== HEAP SUMMARY: ==1948140== in use at exit: 995,542 bytes in 13,910 blocks ==1948140== total heap usage: 1,766,988 allocs, 1,753,078 frees, 1,748,105,724 bytes allocated ==1948140== ==1948140== LEAK SUMMARY: ==1948140== definitely lost: 0 bytes in 0 blocks ==1948140== indirectly lost: 0 bytes in 0 blocks ==1948140== possibly lost: 0 bytes in 0 blocks ==1948140== still reachable: 56 bytes in 3 blocks ==1948140== suppressed: 995,486 bytes in 13,907 blocks ==1948140== Reachable blocks (those to which a pointer was found) are not shown. ==1948140== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1948140== ==1948140== For lists of detected and suppressed errors, rerun with: -s ==1948140== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)