==40010== Memcheck, a memory error detector ==40010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40010== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==40010== Parent PID: 24177 ==40010== ==40010== ==40010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40010== Open file descriptor 12: ==40010== at 0x10D3507D: pipe (pipe.c:29) ==40010== by 0x196C407D: ??? ==40010== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40010== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0xF288D38: PetscInitialize (pinit.c:924) ==40010== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40010== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40010== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40010== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40010== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40010== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40010== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40010== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==40010== ==40010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40010== at 0x10D39A1C: __open_nocancel (open64_nocancel.c:39) ==40010== by 0x10CBDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40010== by 0xF134822: ??? ==40010== by 0xF13496F: ??? ==40010== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40010== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0xF288D38: PetscInitialize (pinit.c:924) ==40010== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40010== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40010== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40010== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40010== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40010== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40010== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40010== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==40010== ==40010== Open file descriptor 113: ==40010== ==40010== ==40010== Open file descriptor 110: ==40010== ==40010== ==40010== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==40010== ==40010== ==40010== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40010== ==40010== ==40010== ==40010== HEAP SUMMARY: ==40010== in use at exit: 618,430 bytes in 8,240 blocks ==40010== total heap usage: 514,145 allocs, 505,905 frees, 1,651,558,329 bytes allocated ==40010== ==40010== LEAK SUMMARY: ==40010== definitely lost: 0 bytes in 0 blocks ==40010== indirectly lost: 0 bytes in 0 blocks ==40010== possibly lost: 0 bytes in 0 blocks ==40010== still reachable: 152 bytes in 4 blocks ==40010== suppressed: 618,278 bytes in 8,236 blocks ==40010== Reachable blocks (those to which a pointer was found) are not shown. ==40010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40010== ==40010== For lists of detected and suppressed errors, rerun with: -s ==40010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)