==26318== Memcheck, a memory error detector ==26318== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26318== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26318== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26318== Parent PID: 24177 ==26318== ==26318== ==26318== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26318== Open file descriptor 12: ==26318== at 0xF92307D: pipe (pipe.c:29) ==26318== by 0x196C407D: ??? ==26318== by 0x14D034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26318== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26318== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26318== by 0x10253D38: PetscInitialize (pinit.c:924) ==26318== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26318== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26318== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26318== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26318== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26318== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26318== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26318== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26318== ==26318== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26318== at 0xF927A1C: __open_nocancel (open64_nocancel.c:39) ==26318== by 0xF8ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26318== by 0xF134822: ??? ==26318== by 0xF13496F: ??? ==26318== by 0x14DA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26318== by 0x14DA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26318== by 0x14D5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26318== by 0x14D032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26318== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26318== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26318== by 0x10253D38: PetscInitialize (pinit.c:924) ==26318== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26318== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26318== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26318== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26318== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26318== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26318== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26318== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26318== ==26318== Open file descriptor 113: ==26318== ==26318== ==26318== Open file descriptor 110: ==26318== ==26318== ==26318== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==26318== ==26318== ==26318== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26318== ==26318== ==26318== ==26318== HEAP SUMMARY: ==26318== in use at exit: 618,430 bytes in 8,240 blocks ==26318== total heap usage: 53,076 allocs, 44,836 frees, 1,338,896,500 bytes allocated ==26318== ==26318== LEAK SUMMARY: ==26318== definitely lost: 0 bytes in 0 blocks ==26318== indirectly lost: 0 bytes in 0 blocks ==26318== possibly lost: 0 bytes in 0 blocks ==26318== still reachable: 152 bytes in 4 blocks ==26318== suppressed: 618,278 bytes in 8,236 blocks ==26318== Reachable blocks (those to which a pointer was found) are not shown. ==26318== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26318== ==26318== For lists of detected and suppressed errors, rerun with: -s ==26318== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)