==44214== Memcheck, a memory error detector ==44214== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44214== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44214== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHeterogeneousConductivities -malloc_debug -malloc_dump -memory_info ==44214== Parent PID: 24034 ==44214== ==44214== ==44214== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44214== Open file descriptor 12: ==44214== at 0xA82407D: pipe (pipe.c:29) ==44214== by 0x1433D07D: ??? ==44214== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44214== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44214== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44214== by 0xABADD38: PetscInitialize (pinit.c:924) ==44214== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44214== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44214== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44214== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44214== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44214== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44214== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44214== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==44214== ==44214== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44214== at 0xA828A1C: __open_nocancel (open64_nocancel.c:39) ==44214== by 0xA7ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44214== by 0xA100822: ??? ==44214== by 0xA10096F: ??? ==44214== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44214== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44214== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44214== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44214== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44214== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44214== by 0xABADD38: PetscInitialize (pinit.c:924) ==44214== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44214== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44214== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44214== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44214== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44214== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44214== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44214== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==44214== ==44214== Open file descriptor 113: ==44214== ==44214== ==44214== Open file descriptor 110: ==44214== ==44214== ==44214== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHeterogeneousConductivities_valgrind.txt ==44214== ==44214== ==44214== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44214== ==44214== ==44214== ==44214== HEAP SUMMARY: ==44214== in use at exit: 618,886 bytes in 8,249 blocks ==44214== total heap usage: 201,469 allocs, 193,220 frees, 1,372,217,900 bytes allocated ==44214== ==44214== LEAK SUMMARY: ==44214== definitely lost: 0 bytes in 0 blocks ==44214== indirectly lost: 0 bytes in 0 blocks ==44214== possibly lost: 0 bytes in 0 blocks ==44214== still reachable: 120 bytes in 3 blocks ==44214== suppressed: 618,766 bytes in 8,246 blocks ==44214== Reachable blocks (those to which a pointer was found) are not shown. ==44214== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44214== ==44214== For lists of detected and suppressed errors, rerun with: -s ==44214== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 38)