==42211== Memcheck, a memory error detector ==42211== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42211== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42211== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42211== Parent PID: 24034 ==42211== ==42211== ==42211== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42211== Open file descriptor 12: ==42211== at 0x85B107D: pipe (pipe.c:29) ==42211== by 0x1433D07D: ??? ==42211== by 0xEE6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42211== by 0x9CAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42211== by 0x9C45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42211== by 0x893CD38: PetscInitialize (pinit.c:924) ==42211== by 0x81982DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42211== by 0x819832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42211== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42211== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42211== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42211== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42211== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42211== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42211== ==42211== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42211== at 0x85B5A1C: __open_nocancel (open64_nocancel.c:39) ==42211== by 0x8539BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42211== by 0x81D2822: ??? ==42211== by 0x81D296F: ??? ==42211== by 0xEF156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42211== by 0xEF15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42211== by 0xEECB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42211== by 0xEE6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42211== by 0x9CAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42211== by 0x9C45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42211== by 0x893CD38: PetscInitialize (pinit.c:924) ==42211== by 0x81982DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42211== by 0x819832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42211== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42211== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42211== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42211== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42211== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42211== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42211== ==42211== Open file descriptor 113: ==42211== ==42211== ==42211== Open file descriptor 110: ==42211== ==42211== ==42211== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42211== ==42211== ==42211== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42211== ==42211== ==42211== ==42211== HEAP SUMMARY: ==42211== in use at exit: 618,406 bytes in 8,239 blocks ==42211== total heap usage: 49,002 allocs, 40,763 frees, 1,338,527,208 bytes allocated ==42211== ==42211== LEAK SUMMARY: ==42211== definitely lost: 0 bytes in 0 blocks ==42211== indirectly lost: 0 bytes in 0 blocks ==42211== possibly lost: 0 bytes in 0 blocks ==42211== still reachable: 120 bytes in 3 blocks ==42211== suppressed: 618,286 bytes in 8,236 blocks ==42211== Reachable blocks (those to which a pointer was found) are not shown. ==42211== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42211== ==42211== For lists of detected and suppressed errors, rerun with: -s ==42211== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)