==26121== Memcheck, a memory error detector ==26121== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26121== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26121== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26121== Parent PID: 24022 ==26121== ==26121== ==26121== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26121== Open file descriptor 12: ==26121== at 0xF96707D: pipe (pipe.c:29) ==26121== by 0x196C407D: ??? ==26121== by 0x14D034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26121== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26121== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26121== by 0x10253D38: PetscInitialize (pinit.c:924) ==26121== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26121== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26121== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26121== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26121== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26121== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26121== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26121== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==26121== ==26121== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26121== at 0xF96BA1C: __open_nocancel (open64_nocancel.c:39) ==26121== by 0xF8EFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26121== by 0xF134822: ??? ==26121== by 0xF13496F: ??? ==26121== by 0x14DA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26121== by 0x14DA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26121== by 0x14D5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26121== by 0x14D032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26121== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26121== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26121== by 0x10253D38: PetscInitialize (pinit.c:924) ==26121== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26121== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26121== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26121== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26121== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26121== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26121== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26121== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==26121== ==26121== Open file descriptor 113: ==26121== ==26121== ==26121== Open file descriptor 110: ==26121== ==26121== ==26121== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26121== ==26121== ==26121== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26121== ==26121== ==26121== ==26121== HEAP SUMMARY: ==26121== in use at exit: 618,434 bytes in 8,240 blocks ==26121== total heap usage: 145,274 allocs, 137,034 frees, 1,366,607,097 bytes allocated ==26121== ==26121== LEAK SUMMARY: ==26121== definitely lost: 0 bytes in 0 blocks ==26121== indirectly lost: 0 bytes in 0 blocks ==26121== possibly lost: 0 bytes in 0 blocks ==26121== still reachable: 152 bytes in 4 blocks ==26121== suppressed: 618,282 bytes in 8,236 blocks ==26121== Reachable blocks (those to which a pointer was found) are not shown. ==26121== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26121== ==26121== For lists of detected and suppressed errors, rerun with: -s ==26121== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)