==43019== Memcheck, a memory error detector ==43019== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43019== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43019== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacElectroMechanicsProblem -malloc_debug -malloc_dump -memory_info ==43019== Parent PID: 24022 ==43019== ==43019== ==43019== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43019== Open file descriptor 12: ==43019== at 0xAC3507D: pipe (pipe.c:29) ==43019== by 0x1433E07D: ??? ==43019== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43019== by 0xA3F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43019== by 0xA390D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43019== by 0xAE40D38: PetscInitialize (pinit.c:924) ==43019== by 0xA2B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43019== by 0xA2B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43019== by 0x1331FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43019== by 0x12C2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43019== by 0x12F672: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43019== by 0x12F512: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43019== by 0x12FBA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43019== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==43019== ==43019== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43019== at 0xAC39A1C: __open_nocancel (open64_nocancel.c:39) ==43019== by 0xABBDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43019== by 0xA2F3822: ??? ==43019== by 0xA2F396F: ??? ==43019== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43019== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43019== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43019== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43019== by 0xA3F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43019== by 0xA390D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43019== by 0xAE40D38: PetscInitialize (pinit.c:924) ==43019== by 0xA2B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43019== by 0xA2B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43019== by 0x1331FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43019== by 0x12C2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43019== by 0x12F672: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43019== by 0x12F512: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43019== by 0x12FBA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43019== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==43019== ==43019== Open file descriptor 113: ==43019== ==43019== ==43019== Open file descriptor 110: ==43019== ==43019== ==43019== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacElectroMechanicsProblem_valgrind.txt ==43019== ==43019== ==43019== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43019== ==43019== ==43019== ==43019== HEAP SUMMARY: ==43019== in use at exit: 618,898 bytes in 8,249 blocks ==43019== total heap usage: 580,636 allocs, 572,387 frees, 1,482,465,919 bytes allocated ==43019== ==43019== LEAK SUMMARY: ==43019== definitely lost: 0 bytes in 0 blocks ==43019== indirectly lost: 0 bytes in 0 blocks ==43019== possibly lost: 0 bytes in 0 blocks ==43019== still reachable: 120 bytes in 3 blocks ==43019== suppressed: 618,778 bytes in 8,246 blocks ==43019== Reachable blocks (those to which a pointer was found) are not shown. ==43019== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43019== ==43019== For lists of detected and suppressed errors, rerun with: -s ==43019== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 79 from 38)