==25723== Memcheck, a memory error detector ==25723== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25723== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25723== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25723== Parent PID: 24022 ==25723== ==25723== ==25723== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25723== Open file descriptor 12: ==25723== at 0xD8DE07D: pipe (pipe.c:29) ==25723== by 0x196C507D: ??? ==25723== by 0x14CB44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25723== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25723== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25723== by 0xFE25D38: PetscInitialize (pinit.c:924) ==25723== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25723== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25723== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25723== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25723== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25723== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25723== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25723== by 0x154225: main (TestSimulationTime.cpp:19) ==25723== ==25723== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25723== at 0xD8E2A1C: __open_nocancel (open64_nocancel.c:39) ==25723== by 0xD866BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25723== by 0xD4D7822: ??? ==25723== by 0xD4D796F: ??? ==25723== by 0x14D596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25723== by 0x14D59938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25723== by 0x14D0F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25723== by 0x14CB42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25723== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25723== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25723== by 0xFE25D38: PetscInitialize (pinit.c:924) ==25723== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25723== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25723== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25723== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25723== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25723== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25723== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25723== by 0x154225: main (TestSimulationTime.cpp:19) ==25723== ==25723== Open file descriptor 113: ==25723== ==25723== ==25723== Open file descriptor 110: ==25723== ==25723== ==25723== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25723== ==25723== ==25723== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25723== ==25723== ==25723== ==25723== HEAP SUMMARY: ==25723== in use at exit: 618,402 bytes in 8,239 blocks ==25723== total heap usage: 53,201 allocs, 44,962 frees, 1,338,914,363 bytes allocated ==25723== ==25723== LEAK SUMMARY: ==25723== definitely lost: 0 bytes in 0 blocks ==25723== indirectly lost: 0 bytes in 0 blocks ==25723== possibly lost: 0 bytes in 0 blocks ==25723== still reachable: 120 bytes in 3 blocks ==25723== suppressed: 618,282 bytes in 8,236 blocks ==25723== Reachable blocks (those to which a pointer was found) are not shown. ==25723== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25723== ==25723== For lists of detected and suppressed errors, rerun with: -s ==25723== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)