==39984== Memcheck, a memory error detector ==39984== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39984== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39984== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==39984== Parent PID: 24151 ==39984== ==39984== ==39984== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39984== Open file descriptor 12: ==39984== at 0x10E1C07D: pipe (pipe.c:29) ==39984== by 0x196C507D: ??? ==39984== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39984== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39984== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39984== by 0xF288D38: PetscInitialize (pinit.c:924) ==39984== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39984== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39984== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39984== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39984== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39984== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39984== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39984== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39984== ==39984== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39984== at 0x10E20A1C: __open_nocancel (open64_nocancel.c:39) ==39984== by 0x10DA4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39984== by 0xF134822: ??? ==39984== by 0xF13496F: ??? ==39984== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39984== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39984== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39984== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39984== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39984== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39984== by 0xF288D38: PetscInitialize (pinit.c:924) ==39984== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39984== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39984== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39984== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39984== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39984== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39984== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39984== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39984== ==39984== Open file descriptor 114: ==39984== ==39984== ==39984== Open file descriptor 111: ==39984== ==39984== ==39984== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==39984== ==39984== ==39984== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39984== ==39984== ==39984== ==39984== HEAP SUMMARY: ==39984== in use at exit: 618,361 bytes in 8,236 blocks ==39984== total heap usage: 8,976,904 allocs, 8,968,668 frees, 2,183,728,240 bytes allocated ==39984== ==39984== LEAK SUMMARY: ==39984== definitely lost: 0 bytes in 0 blocks ==39984== indirectly lost: 0 bytes in 0 blocks ==39984== possibly lost: 0 bytes in 0 blocks ==39984== still reachable: 152 bytes in 4 blocks ==39984== suppressed: 618,209 bytes in 8,232 blocks ==39984== Reachable blocks (those to which a pointer was found) are not shown. ==39984== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39984== ==39984== For lists of detected and suppressed errors, rerun with: -s ==39984== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)