==41918== Memcheck, a memory error detector ==41918== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41918== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41918== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==41918== Parent PID: 24151 ==41918== ==41918== ==41918== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41918== Open file descriptor 12: ==41918== at 0x9CAA07D: pipe (pipe.c:29) ==41918== by 0x1433E07D: ??? ==41918== by 0xEE6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41918== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41918== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41918== by 0x8505D38: PetscInitialize (pinit.c:924) ==41918== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41918== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41918== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41918== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41918== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41918== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41918== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41918== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41918== ==41918== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41918== at 0x9CAEA1C: __open_nocancel (open64_nocancel.c:39) ==41918== by 0x9C32BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41918== by 0x9794822: ??? ==41918== by 0x979496F: ??? ==41918== by 0xEF156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41918== by 0xEF15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41918== by 0xEECB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41918== by 0xEE6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41918== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41918== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41918== by 0x8505D38: PetscInitialize (pinit.c:924) ==41918== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41918== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41918== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41918== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41918== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41918== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41918== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41918== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41918== ==41918== Open file descriptor 114: ==41918== ==41918== ==41918== Open file descriptor 111: ==41918== ==41918== ==41918== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==41918== ==41918== ==41918== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41918== ==41918== ==41918== ==41918== HEAP SUMMARY: ==41918== in use at exit: 618,345 bytes in 8,235 blocks ==41918== total heap usage: 74,027 allocs, 65,792 frees, 1,342,632,394 bytes allocated ==41918== ==41918== LEAK SUMMARY: ==41918== definitely lost: 0 bytes in 0 blocks ==41918== indirectly lost: 0 bytes in 0 blocks ==41918== possibly lost: 0 bytes in 0 blocks ==41918== still reachable: 120 bytes in 3 blocks ==41918== suppressed: 618,225 bytes in 8,232 blocks ==41918== Reachable blocks (those to which a pointer was found) are not shown. ==41918== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41918== ==41918== For lists of detected and suppressed errors, rerun with: -s ==41918== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)