==43819== Memcheck, a memory error detector ==43819== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43819== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43819== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43819== Parent PID: 24151 ==43819== ==43819== ==43819== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43819== Open file descriptor 12: ==43819== at 0xA8F007D: pipe (pipe.c:29) ==43819== by 0x1433E07D: ??? ==43819== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43819== by 0xBFE9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43819== by 0xBF82D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43819== by 0xAC79D38: PetscInitialize (pinit.c:924) ==43819== by 0xA1922DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43819== by 0xA19232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43819== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43819== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43819== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43819== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43819== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43819== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43819== ==43819== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43819== at 0xA8F4A1C: __open_nocancel (open64_nocancel.c:39) ==43819== by 0xA878BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43819== by 0xA1CC822: ??? ==43819== by 0xA1CC96F: ??? ==43819== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43819== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43819== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43819== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43819== by 0xBFE9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43819== by 0xBF82D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43819== by 0xAC79D38: PetscInitialize (pinit.c:924) ==43819== by 0xA1922DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43819== by 0xA19232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43819== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43819== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43819== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43819== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43819== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43819== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43819== ==43819== Open file descriptor 114: ==43819== ==43819== ==43819== Open file descriptor 111: ==43819== ==43819== ==43819== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43819== ==43819== ==43819== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43819== ==43819== ==43819== ==43819== HEAP SUMMARY: ==43819== in use at exit: 618,418 bytes in 8,239 blocks ==43819== total heap usage: 120,269 allocs, 112,030 frees, 1,366,190,172 bytes allocated ==43819== ==43819== LEAK SUMMARY: ==43819== definitely lost: 0 bytes in 0 blocks ==43819== indirectly lost: 0 bytes in 0 blocks ==43819== possibly lost: 0 bytes in 0 blocks ==43819== still reachable: 120 bytes in 3 blocks ==43819== suppressed: 618,298 bytes in 8,236 blocks ==43819== Reachable blocks (those to which a pointer was found) are not shown. ==43819== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43819== ==43819== For lists of detected and suppressed errors, rerun with: -s ==43819== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)