==42014== Memcheck, a memory error detector ==42014== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42014== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42014== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==42014== Parent PID: 24104 ==42014== ==42014== ==42014== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42014== Open file descriptor 12: ==42014== at 0x9CAA07D: pipe (pipe.c:29) ==42014== by 0x1433E07D: ??? ==42014== by 0xEE6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42014== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42014== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42014== by 0x8505D38: PetscInitialize (pinit.c:924) ==42014== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42014== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42014== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42014== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42014== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42014== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42014== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42014== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42014== ==42014== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42014== at 0x9CAEA1C: __open_nocancel (open64_nocancel.c:39) ==42014== by 0x9C32BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42014== by 0x9794822: ??? ==42014== by 0x979496F: ??? ==42014== by 0xEF156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42014== by 0xEF15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42014== by 0xEECB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42014== by 0xEE6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42014== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42014== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42014== by 0x8505D38: PetscInitialize (pinit.c:924) ==42014== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42014== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42014== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42014== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42014== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42014== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42014== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42014== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42014== ==42014== Open file descriptor 113: ==42014== ==42014== ==42014== Open file descriptor 110: ==42014== ==42014== ==42014== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==42014== ==42014== ==42014== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42014== ==42014== ==42014== ==42014== HEAP SUMMARY: ==42014== in use at exit: 618,345 bytes in 8,235 blocks ==42014== total heap usage: 74,024 allocs, 65,789 frees, 1,342,631,773 bytes allocated ==42014== ==42014== LEAK SUMMARY: ==42014== definitely lost: 0 bytes in 0 blocks ==42014== indirectly lost: 0 bytes in 0 blocks ==42014== possibly lost: 0 bytes in 0 blocks ==42014== still reachable: 120 bytes in 3 blocks ==42014== suppressed: 618,225 bytes in 8,232 blocks ==42014== Reachable blocks (those to which a pointer was found) are not shown. ==42014== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42014== ==42014== For lists of detected and suppressed errors, rerun with: -s ==42014== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)