==41567== Memcheck, a memory error detector ==41567== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41567== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41567== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==41567== Parent PID: 24104 ==41567== ==41567== ==41567== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41567== Open file descriptor 12: ==41567== at 0xAC3407D: pipe (pipe.c:29) ==41567== by 0x1433E07D: ??? ==41567== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41567== by 0xC32F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41567== by 0xC2C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41567== by 0xAFBFD38: PetscInitialize (pinit.c:924) ==41567== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41567== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41567== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41567== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41567== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41567== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41567== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41567== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41567== ==41567== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41567== at 0xAC38A1C: __open_nocancel (open64_nocancel.c:39) ==41567== by 0xABBCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41567== by 0xA510822: ??? ==41567== by 0xA51096F: ??? ==41567== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41567== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41567== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41567== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41567== by 0xC32F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41567== by 0xC2C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41567== by 0xAFBFD38: PetscInitialize (pinit.c:924) ==41567== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41567== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41567== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41567== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41567== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41567== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41567== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41567== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41567== ==41567== Open file descriptor 113: ==41567== ==41567== ==41567== Open file descriptor 110: ==41567== ==41567== ==41567== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==41567== ==41567== ==41567== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41567== ==41567== ==41567== ==41567== HEAP SUMMARY: ==41567== in use at exit: 618,898 bytes in 8,249 blocks ==41567== total heap usage: 466,058 allocs, 457,809 frees, 1,446,170,938 bytes allocated ==41567== ==41567== LEAK SUMMARY: ==41567== definitely lost: 0 bytes in 0 blocks ==41567== indirectly lost: 0 bytes in 0 blocks ==41567== possibly lost: 0 bytes in 0 blocks ==41567== still reachable: 120 bytes in 3 blocks ==41567== suppressed: 618,778 bytes in 8,246 blocks ==41567== Reachable blocks (those to which a pointer was found) are not shown. ==41567== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41567== ==41567== For lists of detected and suppressed errors, rerun with: -s ==41567== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)