==26313== Memcheck, a memory error detector ==26313== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26313== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26313== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26313== Parent PID: 24104 ==26313== ==26313== ==26313== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26313== Open file descriptor 12: ==26313== at 0xF0DA07D: pipe (pipe.c:29) ==26313== by 0x196C507D: ??? ==26313== by 0x13C4E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26313== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0xD62DD38: PetscInitialize (pinit.c:924) ==26313== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26313== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26313== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26313== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26313== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26313== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26313== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26313== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26313== ==26313== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26313== at 0xF0DEA1C: __open_nocancel (open64_nocancel.c:39) ==26313== by 0xF062BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26313== by 0xD4D7822: ??? ==26313== by 0xD4D796F: ??? ==26313== by 0x13CF36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x13CF3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x13CA9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x13C4E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26313== by 0xE99D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0xE936D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0xD62DD38: PetscInitialize (pinit.c:924) ==26313== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26313== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26313== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26313== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26313== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26313== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26313== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26313== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26313== ==26313== Open file descriptor 113: ==26313== ==26313== ==26313== Open file descriptor 110: ==26313== ==26313== ==26313== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26313== ==26313== ==26313== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26313== ==26313== ==26313== ==26313== HEAP SUMMARY: ==26313== in use at exit: 618,434 bytes in 8,240 blocks ==26313== total heap usage: 67,526 allocs, 59,286 frees, 1,339,976,106 bytes allocated ==26313== ==26313== LEAK SUMMARY: ==26313== definitely lost: 0 bytes in 0 blocks ==26313== indirectly lost: 0 bytes in 0 blocks ==26313== possibly lost: 0 bytes in 0 blocks ==26313== still reachable: 152 bytes in 4 blocks ==26313== suppressed: 618,282 bytes in 8,236 blocks ==26313== Reachable blocks (those to which a pointer was found) are not shown. ==26313== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26313== ==26313== For lists of detected and suppressed errors, rerun with: -s ==26313== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)