==43041== Memcheck, a memory error detector ==43041== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43041== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43041== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==43041== Parent PID: 24104 ==43041== ==43041== ==43041== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43041== Open file descriptor 12: ==43041== at 0x9CAA07D: pipe (pipe.c:29) ==43041== by 0x1433E07D: ??? ==43041== by 0xEE6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43041== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43041== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43041== by 0x8505D38: PetscInitialize (pinit.c:924) ==43041== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43041== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43041== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43041== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43041== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43041== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43041== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43041== by 0x114C35: main (TestRushLarsen.cpp:18) ==43041== ==43041== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43041== at 0x9CAEA1C: __open_nocancel (open64_nocancel.c:39) ==43041== by 0x9C32BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43041== by 0x9794822: ??? ==43041== by 0x979496F: ??? ==43041== by 0xEF156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43041== by 0xEF15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43041== by 0xEECB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43041== by 0xEE6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43041== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43041== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43041== by 0x8505D38: PetscInitialize (pinit.c:924) ==43041== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43041== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43041== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43041== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43041== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43041== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43041== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43041== by 0x114C35: main (TestRushLarsen.cpp:18) ==43041== ==43041== Open file descriptor 113: ==43041== ==43041== ==43041== Open file descriptor 110: ==43041== ==43041== ==43041== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==43041== ==43041== ==43041== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43041== ==43041== ==43041== ==43041== HEAP SUMMARY: ==43041== in use at exit: 621,896 bytes in 8,243 blocks ==43041== total heap usage: 1,051,892 allocs, 1,043,649 frees, 1,778,843,569 bytes allocated ==43041== ==43041== LEAK SUMMARY: ==43041== definitely lost: 0 bytes in 0 blocks ==43041== indirectly lost: 0 bytes in 0 blocks ==43041== possibly lost: 0 bytes in 0 blocks ==43041== still reachable: 3,671 bytes in 11 blocks ==43041== suppressed: 618,225 bytes in 8,232 blocks ==43041== Reachable blocks (those to which a pointer was found) are not shown. ==43041== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43041== ==43041== For lists of detected and suppressed errors, rerun with: -s ==43041== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)