==26878== Memcheck, a memory error detector ==26878== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26878== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26878== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26878== Parent PID: 24106 ==26878== ==26878== ==26878== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26878== Open file descriptor 12: ==26878== at 0xF96707D: pipe (pipe.c:29) ==26878== by 0x196C507D: ??? ==26878== by 0x14D034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26878== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26878== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26878== by 0x10253D38: PetscInitialize (pinit.c:924) ==26878== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26878== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26878== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26878== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26878== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26878== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26878== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26878== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26878== ==26878== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26878== at 0xF96BA1C: __open_nocancel (open64_nocancel.c:39) ==26878== by 0xF8EFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26878== by 0xF134822: ??? ==26878== by 0xF13496F: ??? ==26878== by 0x14DA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26878== by 0x14DA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26878== by 0x14D5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26878== by 0x14D032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26878== by 0x115C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26878== by 0x1155CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26878== by 0x10253D38: PetscInitialize (pinit.c:924) ==26878== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26878== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26878== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26878== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26878== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26878== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26878== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26878== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26878== ==26878== Open file descriptor 113: ==26878== ==26878== ==26878== Open file descriptor 110: ==26878== ==26878== ==26878== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26878== ==26878== ==26878== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26878== ==26878== ==26878== ==26878== HEAP SUMMARY: ==26878== in use at exit: 618,393 bytes in 8,237 blocks ==26878== total heap usage: 17,826,373 allocs, 17,818,136 frees, 30,026,984,248 bytes allocated ==26878== ==26878== LEAK SUMMARY: ==26878== definitely lost: 0 bytes in 0 blocks ==26878== indirectly lost: 0 bytes in 0 blocks ==26878== possibly lost: 0 bytes in 0 blocks ==26878== still reachable: 184 bytes in 5 blocks ==26878== suppressed: 618,209 bytes in 8,232 blocks ==26878== Reachable blocks (those to which a pointer was found) are not shown. ==26878== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26878== ==26878== For lists of detected and suppressed errors, rerun with: -s ==26878== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)