==25950== Memcheck, a memory error detector ==25950== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25950== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25950== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==25950== Parent PID: 24106 ==25950== ==25950== ==25950== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25950== Open file descriptor 12: ==25950== at 0xF4F707D: pipe (pipe.c:29) ==25950== by 0x196C507D: ??? ==25950== by 0x14CB64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25950== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25950== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25950== by 0xFE25D38: PetscInitialize (pinit.c:924) ==25950== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25950== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25950== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25950== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25950== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25950== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25950== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25950== by 0x113E95: main (TestPottsElement.cpp:19) ==25950== ==25950== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25950== at 0xF4FBA1C: __open_nocancel (open64_nocancel.c:39) ==25950== by 0xF47FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25950== by 0xF134822: ??? ==25950== by 0xF13496F: ??? ==25950== by 0x14D5B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25950== by 0x14D5B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25950== by 0x14D11922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25950== by 0x14CB62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25950== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25950== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25950== by 0xFE25D38: PetscInitialize (pinit.c:924) ==25950== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25950== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25950== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25950== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25950== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25950== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25950== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25950== by 0x113E95: main (TestPottsElement.cpp:19) ==25950== ==25950== Open file descriptor 113: ==25950== ==25950== ==25950== Open file descriptor 110: ==25950== ==25950== ==25950== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==25950== ==25950== ==25950== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25950== ==25950== ==25950== ==25950== HEAP SUMMARY: ==25950== in use at exit: 618,402 bytes in 8,239 blocks ==25950== total heap usage: 53,128 allocs, 44,889 frees, 1,338,889,844 bytes allocated ==25950== ==25950== LEAK SUMMARY: ==25950== definitely lost: 0 bytes in 0 blocks ==25950== indirectly lost: 0 bytes in 0 blocks ==25950== possibly lost: 0 bytes in 0 blocks ==25950== still reachable: 120 bytes in 3 blocks ==25950== suppressed: 618,282 bytes in 8,236 blocks ==25950== Reachable blocks (those to which a pointer was found) are not shown. ==25950== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25950== ==25950== For lists of detected and suppressed errors, rerun with: -s ==25950== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)