==26001== Memcheck, a memory error detector ==26001== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26001== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26001== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMeshReader -malloc_debug -malloc_dump -memory_info ==26001== Parent PID: 24106 ==26001== ==26001== ==26001== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26001== Open file descriptor 12: ==26001== at 0xF4F707D: pipe (pipe.c:29) ==26001== by 0x196C507D: ??? ==26001== by 0x14CB64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26001== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26001== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26001== by 0xFE25D38: PetscInitialize (pinit.c:924) ==26001== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26001== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26001== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26001== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26001== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26001== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26001== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26001== by 0x112935: main (TestPottsMeshReader.cpp:19) ==26001== ==26001== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26001== at 0xF4FBA1C: __open_nocancel (open64_nocancel.c:39) ==26001== by 0xF47FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26001== by 0xF134822: ??? ==26001== by 0xF13496F: ??? ==26001== by 0x14D5B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26001== by 0x14D5B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26001== by 0x14D11922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26001== by 0x14CB62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26001== by 0x11195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26001== by 0x1112ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26001== by 0xFE25D38: PetscInitialize (pinit.c:924) ==26001== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26001== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26001== by 0x118F5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26001== by 0x11450D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26001== by 0x116FE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26001== by 0x116E80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26001== by 0x117517: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26001== by 0x112935: main (TestPottsMeshReader.cpp:19) ==26001== ==26001== Open file descriptor 113: ==26001== ==26001== ==26001== Open file descriptor 110: ==26001== ==26001== ==26001== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMeshReader_valgrind.txt ==26001== ==26001== ==26001== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26001== ==26001== ==26001== ==26001== HEAP SUMMARY: ==26001== in use at exit: 618,402 bytes in 8,239 blocks ==26001== total heap usage: 53,372 allocs, 45,133 frees, 1,339,146,165 bytes allocated ==26001== ==26001== LEAK SUMMARY: ==26001== definitely lost: 0 bytes in 0 blocks ==26001== indirectly lost: 0 bytes in 0 blocks ==26001== possibly lost: 0 bytes in 0 blocks ==26001== still reachable: 120 bytes in 3 blocks ==26001== suppressed: 618,282 bytes in 8,236 blocks ==26001== Reachable blocks (those to which a pointer was found) are not shown. ==26001== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26001== ==26001== For lists of detected and suppressed errors, rerun with: -s ==26001== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)