==41596== Memcheck, a memory error detector ==41596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41596== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41596== Parent PID: 24006 ==41596== ==41596== ==41596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41596== Open file descriptor 12: ==41596== at 0x87F307D: pipe (pipe.c:29) ==41596== by 0x1433E07D: ??? ==41596== by 0xEE6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41596== by 0x9EEE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41596== by 0x9E87D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41596== by 0x8B7ED38: PetscInitialize (pinit.c:924) ==41596== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41596== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41596== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41596== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41596== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41596== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41596== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41596== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41596== ==41596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41596== at 0x87F7A1C: __open_nocancel (open64_nocancel.c:39) ==41596== by 0x877BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41596== by 0x8411822: ??? ==41596== by 0x841196F: ??? ==41596== by 0xEF156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41596== by 0xEF15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41596== by 0xEECB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41596== by 0xEE6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41596== by 0x9EEE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41596== by 0x9E87D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41596== by 0x8B7ED38: PetscInitialize (pinit.c:924) ==41596== by 0x83DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41596== by 0x83DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41596== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41596== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41596== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41596== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41596== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41596== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41596== ==41596== Open file descriptor 113: ==41596== ==41596== ==41596== Open file descriptor 110: ==41596== ==41596== ==41596== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41596== ==41596== ==41596== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41596== ==41596== ==41596== ==41596== HEAP SUMMARY: ==41596== in use at exit: 621,964 bytes in 8,243 blocks ==41596== total heap usage: 3,054,218 allocs, 3,045,975 frees, 1,612,712,506 bytes allocated ==41596== ==41596== LEAK SUMMARY: ==41596== definitely lost: 0 bytes in 0 blocks ==41596== indirectly lost: 0 bytes in 0 blocks ==41596== possibly lost: 0 bytes in 0 blocks ==41596== still reachable: 3,725 bytes in 11 blocks ==41596== suppressed: 618,239 bytes in 8,232 blocks ==41596== Reachable blocks (those to which a pointer was found) are not shown. ==41596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41596== ==41596== For lists of detected and suppressed errors, rerun with: -s ==41596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)