==26159== Memcheck, a memory error detector ==26159== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26159== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26159== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==26159== Parent PID: 23990 ==26159== ==26159== ==26159== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26159== Open file descriptor 12: ==26159== at 0xF83C07D: pipe (pipe.c:29) ==26159== by 0x196C507D: ??? ==26159== by 0x14D034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26159== by 0x114DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26159== by 0x11475D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26159== by 0x1016AD38: PetscInitialize (pinit.c:924) ==26159== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26159== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26159== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26159== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26159== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26159== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26159== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26159== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26159== ==26159== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26159== at 0xF840A1C: __open_nocancel (open64_nocancel.c:39) ==26159== by 0xF7C4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26159== by 0xF12F822: ??? ==26159== by 0xF12F96F: ??? ==26159== by 0x14DA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26159== by 0x14DA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26159== by 0x14D5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26159== by 0x14D032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26159== by 0x114DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26159== by 0x11475D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26159== by 0x1016AD38: PetscInitialize (pinit.c:924) ==26159== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26159== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26159== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26159== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26159== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26159== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26159== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26159== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26159== ==26159== Open file descriptor 113: ==26159== ==26159== ==26159== Open file descriptor 110: ==26159== ==26159== ==26159== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==26159== ==26159== ==26159== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26159== ==26159== ==26159== ==26159== HEAP SUMMARY: ==26159== in use at exit: 618,446 bytes in 8,240 blocks ==26159== total heap usage: 1,124,532 allocs, 1,116,292 frees, 1,415,921,304 bytes allocated ==26159== ==26159== LEAK SUMMARY: ==26159== definitely lost: 0 bytes in 0 blocks ==26159== indirectly lost: 0 bytes in 0 blocks ==26159== possibly lost: 0 bytes in 0 blocks ==26159== still reachable: 152 bytes in 4 blocks ==26159== suppressed: 618,294 bytes in 8,236 blocks ==26159== Reachable blocks (those to which a pointer was found) are not shown. ==26159== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26159== ==26159== For lists of detected and suppressed errors, rerun with: -s ==26159== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)