==40986== Memcheck, a memory error detector ==40986== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40986== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40986== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==40986== Parent PID: 23990 ==40986== ==40986== ==40986== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40986== Open file descriptor 12: ==40986== at 0x826E07D: pipe (pipe.c:29) ==40986== by 0x107BE07D: ??? ==40986== by 0xC01B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40986== by 0x7B31418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40986== by 0x7ACAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40986== by 0x679ED38: PetscInitialize (pinit.c:924) ==40986== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40986== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40986== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40986== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40986== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40986== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40986== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40986== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40986== ==40986== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40986== at 0x8272A1C: __open_nocancel (open64_nocancel.c:39) ==40986== by 0x81F6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40986== by 0x7A28822: ??? ==40986== by 0x7A2896F: ??? ==40986== by 0xC0C06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40986== by 0xC0C0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40986== by 0xC076922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40986== by 0xC01B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40986== by 0x7B31418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40986== by 0x7ACAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40986== by 0x679ED38: PetscInitialize (pinit.c:924) ==40986== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40986== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40986== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40986== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40986== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40986== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40986== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40986== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40986== ==40986== Open file descriptor 113: ==40986== ==40986== ==40986== Open file descriptor 110: ==40986== ==40986== ==40986== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==40986== ==40986== ==40986== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40986== ==40986== ==40986== ==40986== HEAP SUMMARY: ==40986== in use at exit: 618,414 bytes in 8,239 blocks ==40986== total heap usage: 493,344 allocs, 485,105 frees, 1,357,241,584 bytes allocated ==40986== ==40986== LEAK SUMMARY: ==40986== definitely lost: 0 bytes in 0 blocks ==40986== indirectly lost: 0 bytes in 0 blocks ==40986== possibly lost: 0 bytes in 0 blocks ==40986== still reachable: 120 bytes in 3 blocks ==40986== suppressed: 618,294 bytes in 8,236 blocks ==40986== Reachable blocks (those to which a pointer was found) are not shown. ==40986== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40986== ==40986== For lists of detected and suppressed errors, rerun with: -s ==40986== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)