==25960== Memcheck, a memory error detector ==25960== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25960== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25960== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==25960== Parent PID: 23990 ==25960== ==25960== ==25960== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25960== Open file descriptor 12: ==25960== at 0x10DDA07D: pipe (pipe.c:29) ==25960== by 0x196C507D: ??? ==25960== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25960== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0xF223D38: PetscInitialize (pinit.c:924) ==25960== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25960== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25960== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25960== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25960== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25960== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25960== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25960== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==25960== ==25960== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25960== at 0x10DDEA1C: __open_nocancel (open64_nocancel.c:39) ==25960== by 0x10D62BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25960== by 0x104AD822: ??? ==25960== by 0x104AD96F: ??? ==25960== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25960== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0xF223D38: PetscInitialize (pinit.c:924) ==25960== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25960== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25960== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25960== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25960== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25960== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25960== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25960== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==25960== ==25960== Open file descriptor 113: ==25960== ==25960== ==25960== Open file descriptor 110: ==25960== ==25960== ==25960== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==25960== ==25960== ==25960== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25960== ==25960== ==25960== ==25960== HEAP SUMMARY: ==25960== in use at exit: 618,446 bytes in 8,240 blocks ==25960== total heap usage: 221,705 allocs, 213,465 frees, 1,363,637,824 bytes allocated ==25960== ==25960== LEAK SUMMARY: ==25960== definitely lost: 0 bytes in 0 blocks ==25960== indirectly lost: 0 bytes in 0 blocks ==25960== possibly lost: 0 bytes in 0 blocks ==25960== still reachable: 152 bytes in 4 blocks ==25960== suppressed: 618,294 bytes in 8,236 blocks ==25960== Reachable blocks (those to which a pointer was found) are not shown. ==25960== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25960== ==25960== For lists of detected and suppressed errors, rerun with: -s ==25960== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)