==39908== Memcheck, a memory error detector ==39908== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39908== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39908== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDifferentialAdhesionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==39908== Parent PID: 23990 ==39908== ==39908== ==39908== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39908== Open file descriptor 12: ==39908== at 0x10CF307D: pipe (pipe.c:29) ==39908== by 0x196C507D: ??? ==39908== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39908== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39908== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39908== by 0xF223D38: PetscInitialize (pinit.c:924) ==39908== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39908== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39908== by 0x123D23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39908== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39908== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39908== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39908== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39908== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==39908== ==39908== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39908== at 0x10CF7A1C: __open_nocancel (open64_nocancel.c:39) ==39908== by 0x10C7BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39908== by 0x104AD822: ??? ==39908== by 0x104AD96F: ??? ==39908== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39908== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39908== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39908== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39908== by 0x105B6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39908== by 0x1054FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39908== by 0xF223D38: PetscInitialize (pinit.c:924) ==39908== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39908== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39908== by 0x123D23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39908== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39908== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39908== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39908== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39908== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==39908== ==39908== Open file descriptor 113: ==39908== ==39908== ==39908== Open file descriptor 110: ==39908== ==39908== ==39908== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDifferentialAdhesionSimulationsTutorial_valgrind.txt ==39908== ==39908== ==39908== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39908== ==39908== ==39908== ==39908== HEAP SUMMARY: ==39908== in use at exit: 618,391 bytes in 8,237 blocks ==39908== total heap usage: 2,563,996 allocs, 2,555,759 frees, 1,463,683,529 bytes allocated ==39908== ==39908== LEAK SUMMARY: ==39908== definitely lost: 0 bytes in 0 blocks ==39908== indirectly lost: 0 bytes in 0 blocks ==39908== possibly lost: 0 bytes in 0 blocks ==39908== still reachable: 168 bytes in 5 blocks ==39908== suppressed: 618,223 bytes in 8,232 blocks ==39908== Reachable blocks (those to which a pointer was found) are not shown. ==39908== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39908== ==39908== For lists of detected and suppressed errors, rerun with: -s ==39908== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)