==40864== Memcheck, a memory error detector ==40864== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40864== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40864== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestSimpleImpedanceProblem -malloc_debug -malloc_dump -memory_info ==40864== Parent PID: 23990 ==40864== ==40864== ==40864== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40864== Open file descriptor 12: ==40864== at 0x6DB707D: pipe (pipe.c:29) ==40864== by 0x107BC07D: ??? ==40864== by 0xC07E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40864== by 0x8332418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40864== by 0x82CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40864== by 0x6FC2D38: PetscInitialize (pinit.c:924) ==40864== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40864== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40864== by 0x11B118: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40864== by 0x1166AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40864== by 0x119176: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40864== by 0x119016: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40864== by 0x1196AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40864== by 0x114AD5: main (TestSimpleImpedanceProblem.cpp:19) ==40864== ==40864== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40864== at 0x6DBBA1C: __open_nocancel (open64_nocancel.c:39) ==40864== by 0x6D3FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40864== by 0x66AA822: ??? ==40864== by 0x66AA96F: ??? ==40864== by 0xC1236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40864== by 0xC123938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40864== by 0xC0D9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40864== by 0xC07E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40864== by 0x8332418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40864== by 0x82CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40864== by 0x6FC2D38: PetscInitialize (pinit.c:924) ==40864== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40864== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40864== by 0x11B118: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40864== by 0x1166AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40864== by 0x119176: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40864== by 0x119016: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40864== by 0x1196AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40864== by 0x114AD5: main (TestSimpleImpedanceProblem.cpp:19) ==40864== ==40864== Open file descriptor 113: ==40864== ==40864== ==40864== Open file descriptor 110: ==40864== ==40864== ==40864== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleImpedanceProblem_valgrind.txt ==40864== ==40864== ==40864== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40864== ==40864== ==40864== ==40864== HEAP SUMMARY: ==40864== in use at exit: 618,343 bytes in 8,235 blocks ==40864== total heap usage: 7,105,339 allocs, 7,097,104 frees, 1,601,373,112 bytes allocated ==40864== ==40864== LEAK SUMMARY: ==40864== definitely lost: 0 bytes in 0 blocks ==40864== indirectly lost: 0 bytes in 0 blocks ==40864== possibly lost: 0 bytes in 0 blocks ==40864== still reachable: 120 bytes in 3 blocks ==40864== suppressed: 618,223 bytes in 8,232 blocks ==40864== Reachable blocks (those to which a pointer was found) are not shown. ==40864== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40864== ==40864== For lists of detected and suppressed errors, rerun with: -s ==40864== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)