==41189== Memcheck, a memory error detector ==41189== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41189== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41189== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41189== Parent PID: 24092 ==41189== ==41189== ==41189== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41189== Open file descriptor 12: ==41189== at 0xC12D07D: pipe (pipe.c:29) ==41189== by 0x1433F07D: ??? ==41189== by 0xFB2F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41189== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41189== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41189== by 0xA666D38: PetscInitialize (pinit.c:924) ==41189== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41189== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41189== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41189== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41189== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41189== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41189== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41189== by 0x138285: main (TestBidomainProblem.cpp:19) ==41189== ==41189== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41189== at 0xC131A1C: __open_nocancel (open64_nocancel.c:39) ==41189== by 0xC0B5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41189== by 0xA50B822: ??? ==41189== by 0xA50B96F: ??? ==41189== by 0xFBD46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41189== by 0xFBD4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41189== by 0xFB8A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41189== by 0xFB2F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41189== by 0xB9D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41189== by 0xB96FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41189== by 0xA666D38: PetscInitialize (pinit.c:924) ==41189== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41189== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41189== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41189== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41189== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41189== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41189== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41189== by 0x138285: main (TestBidomainProblem.cpp:19) ==41189== ==41189== Open file descriptor 113: ==41189== ==41189== ==41189== Open file descriptor 110: ==41189== ==41189== ==41189== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41189== ==41189== ==41189== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41189== ==41189== ==41189== ==41189== HEAP SUMMARY: ==41189== in use at exit: 618,910 bytes in 8,249 blocks ==41189== total heap usage: 584,916 allocs, 576,667 frees, 1,548,976,859 bytes allocated ==41189== ==41189== LEAK SUMMARY: ==41189== definitely lost: 0 bytes in 0 blocks ==41189== indirectly lost: 0 bytes in 0 blocks ==41189== possibly lost: 0 bytes in 0 blocks ==41189== still reachable: 120 bytes in 3 blocks ==41189== suppressed: 618,790 bytes in 8,246 blocks ==41189== Reachable blocks (those to which a pointer was found) are not shown. ==41189== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41189== ==41189== For lists of detected and suppressed errors, rerun with: -s ==41189== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)