==41199== Memcheck, a memory error detector ==41199== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41199== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41199== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==41199== Parent PID: 24092 ==41199== ==41199== ==41199== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41199== Open file descriptor 12: ==41199== at 0xA82407D: pipe (pipe.c:29) ==41199== by 0x1433E07D: ??? ==41199== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41199== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41199== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41199== by 0xABADD38: PetscInitialize (pinit.c:924) ==41199== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41199== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41199== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41199== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41199== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41199== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41199== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41199== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41199== ==41199== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41199== at 0xA828A1C: __open_nocancel (open64_nocancel.c:39) ==41199== by 0xA7ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41199== by 0xA0FB822: ??? ==41199== by 0xA0FB96F: ??? ==41199== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41199== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41199== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41199== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41199== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41199== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41199== by 0xABADD38: PetscInitialize (pinit.c:924) ==41199== by 0xA0C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41199== by 0xA0C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41199== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41199== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41199== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41199== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41199== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41199== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41199== ==41199== Open file descriptor 113: ==41199== ==41199== ==41199== Open file descriptor 110: ==41199== ==41199== ==41199== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==41199== ==41199== ==41199== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41199== ==41199== ==41199== ==41199== HEAP SUMMARY: ==41199== in use at exit: 618,839 bytes in 8,245 blocks ==41199== total heap usage: 3,540,029 allocs, 3,531,784 frees, 2,046,644,299 bytes allocated ==41199== ==41199== LEAK SUMMARY: ==41199== definitely lost: 0 bytes in 0 blocks ==41199== indirectly lost: 0 bytes in 0 blocks ==41199== possibly lost: 0 bytes in 0 blocks ==41199== still reachable: 120 bytes in 3 blocks ==41199== suppressed: 618,719 bytes in 8,242 blocks ==41199== Reachable blocks (those to which a pointer was found) are not shown. ==41199== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41199== ==41199== For lists of detected and suppressed errors, rerun with: -s ==41199== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 72 from 34)