==43453== Memcheck, a memory error detector ==43453== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43453== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43453== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43453== Parent PID: 24177 ==43453== ==43453== ==43453== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43453== Open file descriptor 12: ==43453== at 0x896907D: pipe (pipe.c:29) ==43453== by 0x1433707D: ??? ==43453== by 0xEEBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43453== by 0xA064418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43453== by 0x9FFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43453== by 0x8CF4D38: PetscInitialize (pinit.c:924) ==43453== by 0x820D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43453== by 0x820D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43453== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43453== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43453== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43453== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43453== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43453== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43453== ==43453== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43453== at 0x896DA1C: __open_nocancel (open64_nocancel.c:39) ==43453== by 0x88F1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43453== by 0x8247822: ??? ==43453== by 0x824796F: ??? ==43453== by 0xEF626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43453== by 0xEF62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43453== by 0xEF18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43453== by 0xEEBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43453== by 0xA064418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43453== by 0x9FFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43453== by 0x8CF4D38: PetscInitialize (pinit.c:924) ==43453== by 0x820D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43453== by 0x820D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43453== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43453== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43453== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43453== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43453== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43453== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43453== ==43453== Open file descriptor 113: ==43453== ==43453== ==43453== Open file descriptor 110: ==43453== ==43453== ==43453== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43453== ==43453== ==43453== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43453== ==43453== ==43453== ==43453== HEAP SUMMARY: ==43453== in use at exit: 625,955 bytes in 8,261 blocks ==43453== total heap usage: 4,757,179 allocs, 4,748,918 frees, 2,829,844,651 bytes allocated ==43453== ==43453== LEAK SUMMARY: ==43453== definitely lost: 0 bytes in 0 blocks ==43453== indirectly lost: 0 bytes in 0 blocks ==43453== possibly lost: 0 bytes in 0 blocks ==43453== still reachable: 7,252 bytes in 19 blocks ==43453== suppressed: 618,703 bytes in 8,242 blocks ==43453== Reachable blocks (those to which a pointer was found) are not shown. ==43453== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43453== ==43453== For lists of detected and suppressed errors, rerun with: -s ==43453== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 229 from 32)