==26123== Memcheck, a memory error detector ==26123== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26123== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26123== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26123== Parent PID: 24123 ==26123== ==26123== ==26123== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26123== Open file descriptor 12: ==26123== at 0xF90F07D: pipe (pipe.c:29) ==26123== by 0x196C007D: ??? ==26123== by 0x14D034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26123== by 0x114DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26123== by 0x11475D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26123== by 0x1016AD38: PetscInitialize (pinit.c:924) ==26123== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26123== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26123== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26123== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26123== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26123== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26123== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26123== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==26123== ==26123== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26123== at 0xF913A1C: __open_nocancel (open64_nocancel.c:39) ==26123== by 0xF897BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26123== by 0xF1BE822: ??? ==26123== by 0xF1BE96F: ??? ==26123== by 0x14DA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26123== by 0x14DA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26123== by 0x14D5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26123== by 0x14D032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26123== by 0x114DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26123== by 0x11475D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26123== by 0x1016AD38: PetscInitialize (pinit.c:924) ==26123== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26123== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26123== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26123== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26123== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26123== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26123== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26123== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==26123== ==26123== Open file descriptor 113: ==26123== ==26123== ==26123== Open file descriptor 110: ==26123== ==26123== ==26123== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26123== ==26123== ==26123== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26123== ==26123== ==26123== ==26123== HEAP SUMMARY: ==26123== in use at exit: 618,361 bytes in 8,236 blocks ==26123== total heap usage: 20,192,633 allocs, 20,184,397 frees, 2,562,962,734 bytes allocated ==26123== ==26123== LEAK SUMMARY: ==26123== definitely lost: 0 bytes in 0 blocks ==26123== indirectly lost: 0 bytes in 0 blocks ==26123== possibly lost: 0 bytes in 0 blocks ==26123== still reachable: 152 bytes in 4 blocks ==26123== suppressed: 618,209 bytes in 8,232 blocks ==26123== Reachable blocks (those to which a pointer was found) are not shown. ==26123== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26123== ==26123== For lists of detected and suppressed errors, rerun with: -s ==26123== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)