==25015== Memcheck, a memory error detector ==25015== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25015== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25015== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==25015== Parent PID: 24160 ==25015== ==25015== ==25015== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25015== Open file descriptor 12: ==25015== at 0x644C07D: pipe (pipe.c:29) ==25015== by 0xB1F907D: ??? ==25015== by 0x8D2E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25015== by 0x603C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25015== by 0x5FD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25015== by 0x4CCCD38: PetscInitialize (pinit.c:924) ==25015== by 0x4B3C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25015== by 0x4B3C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25015== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25015== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25015== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25015== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25015== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25015== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==25015== ==25015== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25015== at 0x6450A1C: __open_nocancel (open64_nocancel.c:39) ==25015== by 0x63D4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25015== by 0x4B71822: ??? ==25015== by 0x4B7196F: ??? ==25015== by 0x8DD36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25015== by 0x8DD3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25015== by 0x8D89922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25015== by 0x8D2E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25015== by 0x603C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25015== by 0x5FD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25015== by 0x4CCCD38: PetscInitialize (pinit.c:924) ==25015== by 0x4B3C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25015== by 0x4B3C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25015== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25015== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25015== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25015== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25015== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25015== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==25015== ==25015== Open file descriptor 113: ==25015== ==25015== ==25015== Open file descriptor 110: ==25015== ==25015== ==25015== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==25015== ==25015== ==25015== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25015== ==25015== ==25015== ==25015== HEAP SUMMARY: ==25015== in use at exit: 617,982 bytes in 8,239 blocks ==25015== total heap usage: 45,966 allocs, 37,727 frees, 1,338,326,778 bytes allocated ==25015== ==25015== LEAK SUMMARY: ==25015== definitely lost: 0 bytes in 0 blocks ==25015== indirectly lost: 0 bytes in 0 blocks ==25015== possibly lost: 0 bytes in 0 blocks ==25015== still reachable: 120 bytes in 3 blocks ==25015== suppressed: 617,862 bytes in 8,236 blocks ==25015== Reachable blocks (those to which a pointer was found) are not shown. ==25015== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25015== ==25015== For lists of detected and suppressed errors, rerun with: -s ==25015== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)