==24357== Memcheck, a memory error detector ==24357== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24357== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24357== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestPetscSetup -malloc_debug -malloc_dump -memory_info ==24357== Parent PID: 24160 ==24357== ==24357== ==24357== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24357== Open file descriptor 12: ==24357== at 0x607707D: pipe (pipe.c:29) ==24357== by 0xAEBA07D: ??? ==24357== by 0x8A0C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24357== by 0x62B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24357== by 0x624DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24357== by 0x4A23D38: PetscInitialize (pinit.c:924) ==24357== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24357== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24357== by 0x113E58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24357== by 0x10F48D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24357== by 0x111EFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24357== by 0x111D9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24357== by 0x112431: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24357== by 0x10D8B5: main (TestPetscSetup.cpp:19) ==24357== ==24357== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24357== at 0x607BA1C: __open_nocancel (open64_nocancel.c:39) ==24357== by 0x5FFFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24357== by 0x5CAD822: ??? ==24357== by 0x5CAD96F: ??? ==24357== by 0x8AB16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24357== by 0x8AB1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24357== by 0x8A67922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24357== by 0x8A0C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24357== by 0x62B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24357== by 0x624DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24357== by 0x4A23D38: PetscInitialize (pinit.c:924) ==24357== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24357== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24357== by 0x113E58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24357== by 0x10F48D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24357== by 0x111EFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24357== by 0x111D9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24357== by 0x112431: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24357== by 0x10D8B5: main (TestPetscSetup.cpp:19) ==24357== ==24357== Open file descriptor 113: ==24357== ==24357== ==24357== Open file descriptor 110: ==24357== ==24357== ==24357== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPetscSetup_valgrind.txt ==24357== ==24357== ==24357== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24357== ==24357== ==24357== ==24357== HEAP SUMMARY: ==24357== in use at exit: 617,918 bytes in 8,239 blocks ==24357== total heap usage: 45,262 allocs, 37,023 frees, 1,338,209,649 bytes allocated ==24357== ==24357== LEAK SUMMARY: ==24357== definitely lost: 0 bytes in 0 blocks ==24357== indirectly lost: 0 bytes in 0 blocks ==24357== possibly lost: 0 bytes in 0 blocks ==24357== still reachable: 120 bytes in 3 blocks ==24357== suppressed: 617,798 bytes in 8,236 blocks ==24357== Reachable blocks (those to which a pointer was found) are not shown. ==24357== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24357== ==24357== For lists of detected and suppressed errors, rerun with: -s ==24357== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)