==25386== Memcheck, a memory error detector ==25386== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25386== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25386== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25386== Parent PID: 24243 ==25386== ==25386== ==25386== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25386== Open file descriptor 12: ==25386== at 0x738A07D: pipe (pipe.c:29) ==25386== by 0x104EA07D: ??? ==25386== by 0xC6594CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25386== by 0x8DFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25386== by 0x8D97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25386== by 0x76D9D38: PetscInitialize (pinit.c:924) ==25386== by 0x68F41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25386== by 0x68F4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25386== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25386== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25386== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25386== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25386== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25386== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25386== ==25386== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25386== at 0x738EA1C: __open_nocancel (open64_nocancel.c:39) ==25386== by 0x7312BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25386== by 0x6929822: ??? ==25386== by 0x692996F: ??? ==25386== by 0xC6FE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25386== by 0xC6FE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25386== by 0xC6B4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25386== by 0xC6592DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25386== by 0x8DFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25386== by 0x8D97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25386== by 0x76D9D38: PetscInitialize (pinit.c:924) ==25386== by 0x68F41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25386== by 0x68F4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25386== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25386== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25386== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25386== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25386== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25386== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25386== ==25386== Open file descriptor 113: ==25386== ==25386== ==25386== Open file descriptor 110: ==25386== ==25386== ==25386== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25386== ==25386== ==25386== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25386== ==25386== ==25386== ==25386== HEAP SUMMARY: ==25386== in use at exit: 618,334 bytes in 8,239 blocks ==25386== total heap usage: 206,012 allocs, 197,773 frees, 1,394,464,649 bytes allocated ==25386== ==25386== LEAK SUMMARY: ==25386== definitely lost: 0 bytes in 0 blocks ==25386== indirectly lost: 0 bytes in 0 blocks ==25386== possibly lost: 0 bytes in 0 blocks ==25386== still reachable: 120 bytes in 3 blocks ==25386== suppressed: 618,214 bytes in 8,236 blocks ==25386== Reachable blocks (those to which a pointer was found) are not shown. ==25386== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25386== ==25386== For lists of detected and suppressed errors, rerun with: -s ==25386== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)