==26311== Memcheck, a memory error detector ==26311== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26311== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26311== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestT2SwapCellKiller -malloc_debug -malloc_dump -memory_info ==26311== Parent PID: 24243 ==26311== ==26311== ==26311== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26311== Open file descriptor 12: ==26311== at 0x10D3507D: pipe (pipe.c:29) ==26311== by 0x196C007D: ??? ==26311== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26311== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0xF288D38: PetscInitialize (pinit.c:924) ==26311== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26311== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26311== by 0x149A6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26311== by 0x142699: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26311== by 0x1454C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26311== by 0x145364: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26311== by 0x1459FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26311== by 0x140AB5: main (TestT2SwapCellKiller.cpp:19) ==26311== ==26311== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26311== at 0x10D39A1C: __open_nocancel (open64_nocancel.c:39) ==26311== by 0x10CBDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26311== by 0xF12F822: ??? ==26311== by 0xF12F96F: ??? ==26311== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26311== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0xF288D38: PetscInitialize (pinit.c:924) ==26311== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26311== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26311== by 0x149A6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26311== by 0x142699: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26311== by 0x1454C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26311== by 0x145364: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26311== by 0x1459FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26311== by 0x140AB5: main (TestT2SwapCellKiller.cpp:19) ==26311== ==26311== Open file descriptor 113: ==26311== ==26311== ==26311== Open file descriptor 110: ==26311== ==26311== ==26311== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestT2SwapCellKiller_valgrind.txt ==26311== ==26311== ==26311== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26311== ==26311== ==26311== ==26311== HEAP SUMMARY: ==26311== in use at exit: 618,430 bytes in 8,240 blocks ==26311== total heap usage: 77,898 allocs, 69,658 frees, 1,343,653,413 bytes allocated ==26311== ==26311== LEAK SUMMARY: ==26311== definitely lost: 0 bytes in 0 blocks ==26311== indirectly lost: 0 bytes in 0 blocks ==26311== possibly lost: 0 bytes in 0 blocks ==26311== still reachable: 152 bytes in 4 blocks ==26311== suppressed: 618,278 bytes in 8,236 blocks ==26311== Reachable blocks (those to which a pointer was found) are not shown. ==26311== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26311== ==26311== For lists of detected and suppressed errors, rerun with: -s ==26311== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)