==40004== Memcheck, a memory error detector ==40004== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40004== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40004== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewForceTutorial -malloc_debug -malloc_dump -memory_info ==40004== Parent PID: 24181 ==40004== ==40004== ==40004== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40004== Open file descriptor 12: ==40004== at 0x10E1C07D: pipe (pipe.c:29) ==40004== by 0x196C007D: ??? ==40004== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40004== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40004== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40004== by 0xF288D38: PetscInitialize (pinit.c:924) ==40004== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40004== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40004== by 0x14368F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40004== by 0x13E09F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40004== by 0x140942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40004== by 0x14083D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40004== by 0x140E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40004== by 0x13C895: main (TestCreatingAndUsingANewForceTutorial.cpp:18) ==40004== ==40004== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40004== at 0x10E20A1C: __open_nocancel (open64_nocancel.c:39) ==40004== by 0x10DA4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40004== by 0xF12F822: ??? ==40004== by 0xF12F96F: ??? ==40004== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40004== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40004== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40004== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40004== by 0x105F8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40004== by 0x10591D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40004== by 0xF288D38: PetscInitialize (pinit.c:924) ==40004== by 0xF0FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40004== by 0xF0FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40004== by 0x14368F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40004== by 0x13E09F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40004== by 0x140942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40004== by 0x14083D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40004== by 0x140E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40004== by 0x13C895: main (TestCreatingAndUsingANewForceTutorial.cpp:18) ==40004== ==40004== Open file descriptor 113: ==40004== ==40004== ==40004== Open file descriptor 110: ==40004== ==40004== ==40004== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewForceTutorial_valgrind.txt ==40004== ==40004== ==40004== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40004== ==40004== ==40004== ==40004== HEAP SUMMARY: ==40004== in use at exit: 618,430 bytes in 8,240 blocks ==40004== total heap usage: 681,542 allocs, 673,302 frees, 1,549,471,743 bytes allocated ==40004== ==40004== LEAK SUMMARY: ==40004== definitely lost: 0 bytes in 0 blocks ==40004== indirectly lost: 0 bytes in 0 blocks ==40004== possibly lost: 0 bytes in 0 blocks ==40004== still reachable: 152 bytes in 4 blocks ==40004== suppressed: 618,278 bytes in 8,236 blocks ==40004== Reachable blocks (those to which a pointer was found) are not shown. ==40004== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40004== ==40004== For lists of detected and suppressed errors, rerun with: -s ==40004== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)