==41343== Memcheck, a memory error detector ==41343== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41343== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41343== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41343== Parent PID: 24181 ==41343== ==41343== ==41343== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41343== Open file descriptor 12: ==41343== at 0xA82407D: pipe (pipe.c:29) ==41343== by 0x1433907D: ??? ==41343== by 0xFB7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41343== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41343== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41343== by 0xABADD38: PetscInitialize (pinit.c:924) ==41343== by 0xA0C61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41343== by 0xA0C6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41343== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41343== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41343== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41343== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41343== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41343== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41343== ==41343== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41343== at 0xA828A1C: __open_nocancel (open64_nocancel.c:39) ==41343== by 0xA7ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41343== by 0xA0FB822: ??? ==41343== by 0xA0FB96F: ??? ==41343== by 0xFC206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41343== by 0xFC20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41343== by 0xFBD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41343== by 0xFB7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41343== by 0xBF1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41343== by 0xBEB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41343== by 0xABADD38: PetscInitialize (pinit.c:924) ==41343== by 0xA0C61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41343== by 0xA0C6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41343== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41343== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41343== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41343== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41343== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41343== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41343== ==41343== Open file descriptor 113: ==41343== ==41343== ==41343== Open file descriptor 110: ==41343== ==41343== ==41343== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==41343== ==41343== ==41343== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41343== ==41343== ==41343== ==41343== HEAP SUMMARY: ==41343== in use at exit: 618,414 bytes in 8,239 blocks ==41343== total heap usage: 115,877 allocs, 107,638 frees, 1,342,953,497 bytes allocated ==41343== ==41343== LEAK SUMMARY: ==41343== definitely lost: 0 bytes in 0 blocks ==41343== indirectly lost: 0 bytes in 0 blocks ==41343== possibly lost: 0 bytes in 0 blocks ==41343== still reachable: 120 bytes in 3 blocks ==41343== suppressed: 618,294 bytes in 8,236 blocks ==41343== Reachable blocks (those to which a pointer was found) are not shown. ==41343== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41343== ==41343== For lists of detected and suppressed errors, rerun with: -s ==41343== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)