==39590== Memcheck, a memory error detector ==39590== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39590== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39590== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39590== Parent PID: 23935 ==39590== ==39590== ==39590== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39590== Open file descriptor 12: ==39590== at 0xF83907D: pipe (pipe.c:29) ==39590== by 0x196AE07D: ??? ==39590== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39590== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39590== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39590== by 0x10125D38: PetscInitialize (pinit.c:924) ==39590== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39590== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39590== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39590== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39590== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39590== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39590== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39590== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39590== ==39590== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39590== at 0xF83DA1C: __open_nocancel (open64_nocancel.c:39) ==39590== by 0xF7C1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39590== by 0xF12F822: ??? ==39590== by 0xF12F96F: ??? ==39590== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39590== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39590== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39590== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39590== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39590== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39590== by 0x10125D38: PetscInitialize (pinit.c:924) ==39590== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39590== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39590== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39590== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39590== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39590== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39590== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39590== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39590== ==39590== Open file descriptor 113: ==39590== ==39590== ==39590== Open file descriptor 110: ==39590== ==39590== ==39590== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39590== ==39590== ==39590== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39590== ==39590== ==39590== ==39590== HEAP SUMMARY: ==39590== in use at exit: 618,311 bytes in 8,236 blocks ==39590== total heap usage: 11,260,957 allocs, 11,252,721 frees, 3,060,133,921 bytes allocated ==39590== ==39590== LEAK SUMMARY: ==39590== definitely lost: 0 bytes in 0 blocks ==39590== indirectly lost: 0 bytes in 0 blocks ==39590== possibly lost: 0 bytes in 0 blocks ==39590== still reachable: 72 bytes in 4 blocks ==39590== suppressed: 618,239 bytes in 8,232 blocks ==39590== Reachable blocks (those to which a pointer was found) are not shown. ==39590== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39590== ==39590== For lists of detected and suppressed errors, rerun with: -s ==39590== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)