==40987== Memcheck, a memory error detector ==40987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40987== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==40987== Parent PID: 23887 ==40987== ==40987== ==40987== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40987== Open file descriptor 12: ==40987== at 0xBC0507D: pipe (pipe.c:29) ==40987== by 0x1432707D: ??? ==40987== by 0xFAE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40987== by 0xB4F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40987== by 0xB48CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40987== by 0xA160D38: PetscInitialize (pinit.c:924) ==40987== by 0xA0372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40987== by 0xA03732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40987== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40987== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40987== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40987== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40987== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40987== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40987== ==40987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40987== at 0xBC09A1C: __open_nocancel (open64_nocancel.c:39) ==40987== by 0xBB8DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40987== by 0xB3EA822: ??? ==40987== by 0xB3EA96F: ??? ==40987== by 0xFB8E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40987== by 0xFB8E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40987== by 0xFB44922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40987== by 0xFAE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40987== by 0xB4F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40987== by 0xB48CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40987== by 0xA160D38: PetscInitialize (pinit.c:924) ==40987== by 0xA0372DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40987== by 0xA03732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40987== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40987== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40987== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40987== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40987== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40987== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40987== ==40987== Open file descriptor 113: ==40987== ==40987== ==40987== Open file descriptor 110: ==40987== ==40987== ==40987== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==40987== ==40987== ==40987== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40987== ==40987== ==40987== ==40987== HEAP SUMMARY: ==40987== in use at exit: 618,826 bytes in 8,248 blocks ==40987== total heap usage: 428,253 allocs, 420,005 frees, 1,437,394,150 bytes allocated ==40987== ==40987== LEAK SUMMARY: ==40987== definitely lost: 0 bytes in 0 blocks ==40987== indirectly lost: 0 bytes in 0 blocks ==40987== possibly lost: 0 bytes in 0 blocks ==40987== still reachable: 24 bytes in 2 blocks ==40987== suppressed: 618,802 bytes in 8,246 blocks ==40987== Reachable blocks (those to which a pointer was found) are not shown. ==40987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40987== ==40987== For lists of detected and suppressed errors, rerun with: -s ==40987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)