==25864== Memcheck, a memory error detector ==25864== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25864== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25864== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellWriters -malloc_debug -malloc_dump -memory_info ==25864== Parent PID: 23887 ==25864== ==25864== ==25864== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25864== Open file descriptor 12: ==25864== at 0xFB0C07D: pipe (pipe.c:29) ==25864== by 0x196AD07D: ??? ==25864== by 0x14CB94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25864== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25864== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25864== by 0x10125D38: PetscInitialize (pinit.c:924) ==25864== by 0xF3CB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25864== by 0xF3CB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25864== by 0x144A2A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25864== by 0x13CE5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25864== by 0x14024C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25864== by 0x1400EC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25864== by 0x140783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25864== by 0x13B285: main (TestCellWriters.cpp:19) ==25864== ==25864== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25864== at 0xFB10A1C: __open_nocancel (open64_nocancel.c:39) ==25864== by 0xFA94BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25864== by 0xF400822: ??? ==25864== by 0xF40096F: ??? ==25864== by 0x14D5E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25864== by 0x14D5E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25864== by 0x14D14922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25864== by 0x14CB92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25864== by 0x11497418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25864== by 0x11430D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25864== by 0x10125D38: PetscInitialize (pinit.c:924) ==25864== by 0xF3CB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25864== by 0xF3CB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25864== by 0x144A2A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25864== by 0x13CE5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25864== by 0x14024C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25864== by 0x1400EC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25864== by 0x140783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25864== by 0x13B285: main (TestCellWriters.cpp:19) ==25864== ==25864== Open file descriptor 113: ==25864== ==25864== ==25864== Open file descriptor 110: ==25864== ==25864== ==25864== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellWriters_valgrind.txt ==25864== ==25864== ==25864== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25864== ==25864== ==25864== ==25864== HEAP SUMMARY: ==25864== in use at exit: 618,362 bytes in 8,239 blocks ==25864== total heap usage: 69,781 allocs, 61,542 frees, 1,342,419,812 bytes allocated ==25864== ==25864== LEAK SUMMARY: ==25864== definitely lost: 0 bytes in 0 blocks ==25864== indirectly lost: 0 bytes in 0 blocks ==25864== possibly lost: 0 bytes in 0 blocks ==25864== still reachable: 56 bytes in 3 blocks ==25864== suppressed: 618,306 bytes in 8,236 blocks ==25864== Reachable blocks (those to which a pointer was found) are not shown. ==25864== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25864== ==25864== For lists of detected and suppressed errors, rerun with: -s ==25864== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)