==25094== Memcheck, a memory error detector ==25094== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25094== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25094== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25094== Parent PID: 23887 ==25094== ==25094== ==25094== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25094== Open file descriptor 12: ==25094== at 0x734507D: pipe (pipe.c:29) ==25094== by 0x104D807D: ??? ==25094== by 0xC6094CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25094== by 0x8DB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25094== by 0x8D52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25094== by 0x7694D38: PetscInitialize (pinit.c:924) ==25094== by 0x68F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25094== by 0x68F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25094== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25094== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25094== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25094== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25094== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25094== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25094== ==25094== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25094== at 0x7349A1C: __open_nocancel (open64_nocancel.c:39) ==25094== by 0x72CDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25094== by 0x6929822: ??? ==25094== by 0x692996F: ??? ==25094== by 0xC6AE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25094== by 0xC6AE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25094== by 0xC664922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25094== by 0xC6092DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25094== by 0x8DB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25094== by 0x8D52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25094== by 0x7694D38: PetscInitialize (pinit.c:924) ==25094== by 0x68F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25094== by 0x68F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25094== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25094== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25094== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25094== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25094== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25094== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25094== ==25094== Open file descriptor 113: ==25094== ==25094== ==25094== Open file descriptor 110: ==25094== ==25094== ==25094== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25094== ==25094== ==25094== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25094== ==25094== ==25094== ==25094== HEAP SUMMARY: ==25094== in use at exit: 618,266 bytes in 8,238 blocks ==25094== total heap usage: 206,013 allocs, 197,775 frees, 1,394,472,566 bytes allocated ==25094== ==25094== LEAK SUMMARY: ==25094== definitely lost: 0 bytes in 0 blocks ==25094== indirectly lost: 0 bytes in 0 blocks ==25094== possibly lost: 0 bytes in 0 blocks ==25094== still reachable: 24 bytes in 2 blocks ==25094== suppressed: 618,242 bytes in 8,236 blocks ==25094== Reachable blocks (those to which a pointer was found) are not shown. ==25094== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25094== ==25094== For lists of detected and suppressed errors, rerun with: -s ==25094== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)