==25307== Memcheck, a memory error detector ==25307== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25307== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25307== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25307== Parent PID: 23887 ==25307== ==25307== ==25307== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25307== Open file descriptor 12: ==25307== at 0xEF9207D: pipe (pipe.c:29) ==25307== by 0x196AD07D: ??? ==25307== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25307== by 0xEBDF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25307== by 0xEB78D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25307== by 0xD86FD38: PetscInitialize (pinit.c:924) ==25307== by 0xD6E12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25307== by 0xD6E132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25307== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25307== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25307== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25307== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25307== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25307== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25307== ==25307== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25307== at 0xEF96A1C: __open_nocancel (open64_nocancel.c:39) ==25307== by 0xEF1ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25307== by 0xD716822: ??? ==25307== by 0xD71696F: ??? ==25307== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25307== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25307== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25307== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25307== by 0xEBDF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25307== by 0xEB78D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25307== by 0xD86FD38: PetscInitialize (pinit.c:924) ==25307== by 0xD6E12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25307== by 0xD6E132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25307== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25307== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25307== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25307== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25307== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25307== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25307== ==25307== Open file descriptor 113: ==25307== ==25307== ==25307== Open file descriptor 110: ==25307== ==25307== ==25307== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25307== ==25307== ==25307== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25307== ==25307== ==25307== ==25307== HEAP SUMMARY: ==25307== in use at exit: 618,309 bytes in 8,236 blocks ==25307== total heap usage: 4,179,302 allocs, 4,171,066 frees, 1,770,075,611 bytes allocated ==25307== ==25307== LEAK SUMMARY: ==25307== definitely lost: 0 bytes in 0 blocks ==25307== indirectly lost: 0 bytes in 0 blocks ==25307== possibly lost: 0 bytes in 0 blocks ==25307== still reachable: 72 bytes in 4 blocks ==25307== suppressed: 618,237 bytes in 8,232 blocks ==25307== Reachable blocks (those to which a pointer was found) are not shown. ==25307== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25307== ==25307== For lists of detected and suppressed errors, rerun with: -s ==25307== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)