==40996== Memcheck, a memory error detector ==40996== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40996== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40996== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestVentilationProblem -malloc_debug -malloc_dump -memory_info ==40996== Parent PID: 23926 ==40996== ==40996== ==40996== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40996== Open file descriptor 12: ==40996== at 0x6E5907D: pipe (pipe.c:29) ==40996== by 0x107A707D: ??? ==40996== by 0xC01A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40996== by 0x83D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x836DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x7064D38: PetscInitialize (pinit.c:924) ==40996== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40996== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40996== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40996== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40996== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40996== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40996== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40996== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40996== ==40996== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40996== at 0x6E5DA1C: __open_nocancel (open64_nocancel.c:39) ==40996== by 0x6DE1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40996== by 0x66AA822: ??? ==40996== by 0x66AA96F: ??? ==40996== by 0xC0BF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0xC0BF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0xC075922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0xC01A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40996== by 0x83D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x836DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x7064D38: PetscInitialize (pinit.c:924) ==40996== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40996== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40996== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40996== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40996== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40996== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40996== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40996== by 0x110B55: main (TestVentilationProblem.cpp:19) ==40996== ==40996== Open file descriptor 113: ==40996== ==40996== ==40996== Open file descriptor 110: ==40996== ==40996== ==40996== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVentilationProblem_valgrind.txt ==40996== ==40996== ==40996== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40996== ==40996== ==40996== ==40996== HEAP SUMMARY: ==40996== in use at exit: 618,263 bytes in 8,234 blocks ==40996== total heap usage: 5,806,640 allocs, 5,798,406 frees, 1,825,961,226 bytes allocated ==40996== ==40996== LEAK SUMMARY: ==40996== definitely lost: 0 bytes in 0 blocks ==40996== indirectly lost: 0 bytes in 0 blocks ==40996== possibly lost: 0 bytes in 0 blocks ==40996== still reachable: 24 bytes in 2 blocks ==40996== suppressed: 618,239 bytes in 8,232 blocks ==40996== Reachable blocks (those to which a pointer was found) are not shown. ==40996== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40996== ==40996== For lists of detected and suppressed errors, rerun with: -s ==40996== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)