==25975== Memcheck, a memory error detector ==25975== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25975== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25975== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==25975== Parent PID: 23887 ==25975== ==25975== ==25975== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25975== Open file descriptor 12: ==25975== at 0xF8DE07D: pipe (pipe.c:29) ==25975== by 0x196AE07D: ??? ==25975== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25975== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25975== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25975== by 0x1020ED38: PetscInitialize (pinit.c:924) ==25975== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25975== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25975== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25975== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25975== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25975== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25975== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25975== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==25975== ==25975== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25975== at 0xF8E2A1C: __open_nocancel (open64_nocancel.c:39) ==25975== by 0xF866BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25975== by 0xF12F822: ??? ==25975== by 0xF12F96F: ??? ==25975== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25975== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25975== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25975== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25975== by 0x1157E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25975== by 0x11517D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25975== by 0x1020ED38: PetscInitialize (pinit.c:924) ==25975== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25975== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25975== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25975== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25975== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25975== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25975== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25975== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==25975== ==25975== Open file descriptor 113: ==25975== ==25975== ==25975== Open file descriptor 110: ==25975== ==25975== ==25975== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==25975== ==25975== ==25975== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25975== ==25975== ==25975== ==25975== HEAP SUMMARY: ==25975== in use at exit: 618,370 bytes in 8,239 blocks ==25975== total heap usage: 53,075 allocs, 44,836 frees, 1,338,902,447 bytes allocated ==25975== ==25975== LEAK SUMMARY: ==25975== definitely lost: 0 bytes in 0 blocks ==25975== indirectly lost: 0 bytes in 0 blocks ==25975== possibly lost: 0 bytes in 0 blocks ==25975== still reachable: 56 bytes in 3 blocks ==25975== suppressed: 618,314 bytes in 8,236 blocks ==25975== Reachable blocks (those to which a pointer was found) are not shown. ==25975== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25975== ==25975== For lists of detected and suppressed errors, rerun with: -s ==25975== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)