==40862== Memcheck, a memory error detector ==40862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40862== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMultiLobeAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40862== Parent PID: 23829 ==40862== ==40862== ==40862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40862== Open file descriptor 12: ==40862== at 0x8D2D07D: pipe (pipe.c:29) ==40862== by 0x107A807D: ??? ==40862== by 0xC0944CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40862== by 0x7B31418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40862== by 0x7ACAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40862== by 0x679ED38: PetscInitialize (pinit.c:924) ==40862== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40862== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40862== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40862== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40862== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40862== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40862== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40862== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40862== ==40862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40862== at 0x8D31A1C: __open_nocancel (open64_nocancel.c:39) ==40862== by 0x8CB5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40862== by 0x7A28822: ??? ==40862== by 0x7A2896F: ??? ==40862== by 0xC1396DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40862== by 0xC139938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40862== by 0xC0EF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40862== by 0xC0942DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40862== by 0x7B31418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40862== by 0x7ACAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40862== by 0x679ED38: PetscInitialize (pinit.c:924) ==40862== by 0x66752DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40862== by 0x667532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40862== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40862== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40862== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40862== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40862== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40862== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40862== ==40862== Open file descriptor 113: ==40862== ==40862== ==40862== Open file descriptor 110: ==40862== ==40862== ==40862== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMultiLobeAirwayGenerator_valgrind.txt ==40862== ==40862== ==40862== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40862== ==40862== ==40862== ==40862== HEAP SUMMARY: ==40862== in use at exit: 618,330 bytes in 8,238 blocks ==40862== total heap usage: 175,714 allocs, 167,476 frees, 1,419,543,874 bytes allocated ==40862== ==40862== LEAK SUMMARY: ==40862== definitely lost: 0 bytes in 0 blocks ==40862== indirectly lost: 0 bytes in 0 blocks ==40862== possibly lost: 0 bytes in 0 blocks ==40862== still reachable: 24 bytes in 2 blocks ==40862== suppressed: 618,306 bytes in 8,236 blocks ==40862== Reachable blocks (those to which a pointer was found) are not shown. ==40862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40862== ==40862== For lists of detected and suppressed errors, rerun with: -s ==40862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)